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Hydrogen bonding occurs in many facets in chemistry and biology. It is, for instance, a key interaction in biomolecules, e.g. to stabilize protein structures and to direct DNA assembly.

FIGURE 1: Hydrogen Bonding in Nature

Hydrogen-bonding 3
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In supramolecular chemistry, it similarly allows the design and construction of larger superstructures and functional materials. In the last decades, hydrogen bond donors (hydrogen-based Lewis acids) have also been very successfully introduced as noncovalent organocatalysts. In these catalyses, the hydrogen bond donors forms a reversible contact with a Lewis-basic substrate (e.g. a carbonyl group) and thus activates it for various transformations (which can also be performed with high enantioselectivity if a suitable chiral catalyst is used).

SHEME 1: Hydrogen Bonding in Organocatalysis

Hb Organokatalyse
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So, hydrogen bonding is at the core of many important applications, and a broad variety of hydrogen bond donors have been designed for these tasks. However: all these compounds obviously share the very same interacting atom, hydrogen. This is in stark contrast e.g. to metal-based Lewis acids, where multiple different metal centers are avaible, which allows the fine-tuning of catalyst-substrate combinations right at the interacting center. Hydrogen bond donors are naturally confined to one element, which is very small and „hard“ (in HSAB terms) and may thus not be ideal for a range of substrates.

What if we could use noncovalent interactions in supramolecular chemistry and organocatalysis that are based on other main group elements than hydrogen, but are just as powerful as hydrogen bonding? This, in a nutshell, is our key goal, and the interactions we employ are halogen bonding and chalcogen bonding (see below).

FIGURE 2: Halogen / Chalcogen Bonding

Hb-xb 3
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Imagine for a moment a situation in which hydrogen bonding has been „rediscovered“ for solid-state supramolecular chemistry in the 1990s but for organocatalysis only in about 2010 (with first enantioselective reactions in 2020). This is essentially the situation for halogen bonding, and chalcogen bonding has been studied in solution only from 2015 on. Now, think about all the possible applications of these interactions that are still to be developed….

INTRODUCTION: HALOGEN BONDING AND CHALCOGEN BONDING


Halogen bonding is the attractive non-covalent interaction between electrophilic halogen atoms in compounds R-X (X = Cl, Br, I) and Lewis bases.

FIGURE 3: Definition of Halogen Bonding

Halogenbruecken Definition Color E N
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(R= organic or inorganic group; X= Cl, Br, I; D= Lewis-Base with N, O, S, X, ... donor atom)
(R= organic or inorganic group; X= Cl, Br, I; D= Lewis-Base with N, O, S, X, ... donor atom)

 

Reasonably strong halogen bonds (“XBs“) are only obtained when a strongly electronegative substituent R is bound to the halogen atom. Although they have been known for a long time, XBs have only received increased interest since the early 1990s, mostly in solid state investigations (“crystal engineering”). Applications in solution are still rare.


A related interaction is chalcogen bonding, in which electrophilic chalcogen substituents (typically S, Se, Te) act as Lewis acids:

FIGURE 4: DEFINITION OF CHALCOGEN BONDING

Chalcogenbrücken Definition Color Nn
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(Ch= chalcogen)
(Ch= chalcogen)

 

Chalcogen bonding is even less explored than halogen bonding, with only a handful of studies on intermolecular chalcogen bonding in solution having been published.

Halogen and chalcogen bonds share many similarities with hydrogen bonds but also feature some distinct advantages: a softer interacting atom, a higher directionality, a better tunability, and in some cases a markedly higher hydrophobicity.

HALOGEN BONDING IN ORGANOCATALYSIS

Our primary goal is to develop new applications of XBs in organic synthesis and organocatalysis, e.g. via the non-covalent activation of electrophiles. Towards this end, a special focus of our research is on the rational design of novel multidentate XB donors.


In several proof-of-principle cases, we could demonstrate that cationic XB donors which are based on haloimidazolium, halopyridinium, or halotriazolium moieties are able to activate a carbon-heteroatom bond. In each case, and for the first time, the activity could be clearly linked to halogen bonding [Angew. Chem. Int. Ed. 201150, 7181]. Using neutral polyfluorinated XB donors like the terphenyl derivative shown in Scheme 1, we could realize an XB-based organocatalytic halide abstraction reaction [Angew. Chem. Int. Ed. 201352, 7028]:

SCHEME 2: ORGANOCATALYSIS BY NEUTRAL MULTIDENTATE HALOGEN-BOND DONORS

Fsp Isochroman V2 N
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Subsequently, this concept could also be extended towards the activation of neutral organic substrates like carbonyl compounds (Scheme 2) [Chem. Commun. 201450, 6281]:

SCHEME 3: XB-CATALYZED DIELS-ALDER REACTION

Carbonyl N
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Based on systematic studies, isothermal titrations, and quantum-chemical calculations, we are further optimizing the catalyst structures. As an interesting structural variation, we could also demonstrate for the first time that hypervalent iodine(III) compounds may act as Lewis acidic organocatalysts through halogen bonding (see the iodolium derivatives in Figure 3) [Angew. Chem. Int. Ed. 201857, 3892].

FIGURE 5: HYPERVALENT IODINE(III) DERIVATIVES AS HALOGEN BONDING ORGANOCATALYSTS

Iodolium N
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Ongoing projects in this area are mostly dealing with XB-catalyzed enantioselective transformations. A further goal is the combination of halogen bonding with other modes of activation in bifunctional or multifunctional catalysts.

Overall, we envision that a second class of non-covalent interactions will complement the ubiquitous hydrogen bond, which already finds frequent use in organocatalysis (e.g. in thiourea derivatives). Because of the different electronic nature of the interaction, different substrate scopes and selectivities are to be expected in comparison to the classical, hydrogen-bond based organocatalysts.

HALOGEN BONDING IN MOLECULAR RECOGNITION

Currently, there are very few examples of halogen-bond complexes which are bound by multipoint interactions, i.e. the interaction of several XB donor sites on one molecule with several Lewis basic sites on a second molecule. However, true multipoint interactions are the basis of molecular recognition and are the ideal basis of strong and rigid materials. As a first step towards this goal, we introduced the first three-point halogen-bonded complex (Figure 4) between a polyfluorinated and -iodinated quaterphenyl and an orthoamide [J. Am. Chem. Soc. 2014136, 16740]. This represents the first case of halogen-bond-based molecular recognition, as other amines are bound markedly weaker by this XB donor.


Subsequently, we could show in a cooperation with the Waldvogel group in Mainz that the same XB donor detects acetone in the gas phase, even in the presence of an excess of water [Chem. Commun. 201551, 2040]. Ongoing projects aim to extend this concept to more complex recognition processes, aiming also at enantioseparation and -detection.

FIGURE 6: THREE-POINT HALOGEN BONDING

Dreipunkt N
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HALOGEN-BOND-BASED SUPRAMOLECULAR ASSEMBLIES

In this line of research, we want to either assemble complex supramolecular architectures by halogen bonding linkers or to modify existing supramolecular systems with multiple XB donating sites. In the mid- and long-term, we also aim to utilize halogen bonding as a further level of hierarchy in the assembly of supra-molecular structures.

CHALCOGEN BONDING IN ORGANOCATALYSIS

Parallel to our work on halogen bonding, we also strive to establish chalcogen bonding as a viable tool in non-covalent organocatalysis. In a proof-of-principle case study, we could show for the first time that selenium-based Lewis acids may be used as activators and that their mode of action is very likely based on chalcogen bonding (Scheme 3) [Angew. Chem. Int. Ed. 201756, 12009].

SCHEME 4: FIRST PROOF-OF-PRINCIPLE FOR SELENIUM-BASED CHALCOGEN BONDING LEWIS ACIDIC ACTIVATORS

Se-bhb N
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While this first application still required a stoichiometric use of the Lewis acid, we could subsequently also establish the first use of organoselenium derivatives as non-covalent organocatalysts [Chem. Eur. J. 201723, 16972].


Currently we are extending these lead results towards enantioselective processes and towards processes which utilize the unique feature of chalcogen bonding: the presence of two electrophilic axes.

If you are interested to join our group, please contact Prof. Huber via email.

CONTACT
Prof. Dr. Stefan Huber

Room: NC4 / 170
Phone: +49 234 32 - 21584
E-Mail

JOBS

POSTDOC

We have no funded postdoc positions available, but will gladly assist suitable candidates with scholarship applications. Please apply by email (but note that unspecific mass email applications will not be considered, nor will a response be given).

MASTER THESIS AND PH.D.

Prospective master thesis and Ph.D. students interested in the fields of organocatalysis and supramolecular chemistry are invited to apply by email. We will also assist suitable candidates with scholarship applications.

RESEARCH INTERNSHIP AND BACHELOR THESIS

Interested to join our group for an in-depth practical ("Vertiefungspraktikum") or a Bachelor thesis? To arrange further details please contact Dr. Dirk Grote. Note: To start with your Bachelor thesis, you should have completed the advanced practical course in organic chemistry.

Candidates interested in a specialization practical ("Spezialisierungspraktikum") or a master thesis should contact Prof. Huber directly.